Number of Reads | 439,931,976 |
Valid Barcodes | 97.9% |
Sequencing Saturation | 46.2% |
Q30 Bases in Barcode | 95.3% |
Q30 Bases in RNA Read | 85.2% |
Q30 Bases in Sample Index | 95.1% |
Q30 Bases in UMI | 94.2% |
Reads Mapped to Genome | 95.6% |
Reads Mapped Confidently to Genome | 92.7% |
Reads Mapped Confidently to Intergenic Regions | 5.4% |
Reads Mapped Confidently to Intronic Regions | 17.8% |
Reads Mapped Confidently to Exonic Regions | 69.5% |
Reads Mapped Confidently to Transcriptome | 66.0% |
Reads Mapped Antisense to Gene | 1.0% |
Estimated Number of Cells | 1,648 |
Fraction Reads in Cells | 93.9% |
Mean Reads per Cell | 266,949 |
Median Genes per Cell | 8,334 |
Total Genes Detected | 24,626 |
Median UMI Counts per Cell | 88,674 |
Name | cellmix_Lib90 |
Description | |
Transcriptome | GRCh38 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.2 |
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