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Fig2-MaHV1 trees.tiff (325.26 kB)

Phylogenetic relationship between macropodid herpesvirus 1 (MaHV1) and other viruses from the Alphaherpesvirinae subfamily.

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posted on 2016-09-12, 14:56 authored by PAOLA VAZPAOLA VAZ, Timothy Mahony, CAROL HARTLEYCAROL HARTLEY, Elizabeth V. Fowler, NINO FICORILLININO FICORILLI, Sang W. Lee, James Gikerson, GLENN BROWNINGGLENN BROWNING, JOANNE DEVLINJOANNE DEVLIN
The relationship between macropodid herpesvirus 1 (MaHV1) and other viruses from the Alphaherpesvirinae subfamily. Neighbour-joining distance trees were generated using the translated protein sequences of conserved herpesvirus ORFs: a glycoprotein B, gB (UL27); b DNA polymerase, DPOL (UL30); and c glycoprotein D, gD (US6). Bootstrap values (10,000 replicates) are shown for each branch, with Gallid herpesvirus 2 (GaHV2) as an outgroup. The abbreviations and GenBank accession details are: macropodid herpesvirus 2 (MaHV2) [GenBank:AAD11961, GenBank:AAL13143, gB and gD], macropodid herpesvirus 4 (MaHV4) [GenBank:AGC54689, gB], macacine herpesvirus 1 (HBV) [GenBank:AAA85652, GenBank:NP_851890, GenBank:AAB24129, gB, DPOL and gD], fruit bat herpesvirus 1 (FbHV1) [GenBank:YP_009042089, GenBank:YP_009042092, GenBank:YP_009042126, gB, DPOL and gD], gallid herpesvirus 1 (GaHV1) [GenBank:AEB97319 , GenBank:AEB97322, GenBank:AEB97368, gB, DPOL and gD], gallid herpesvirus 2 (GaHV2) [GenBank:CAA63039, GenBank:YP_001033959, GenBank:AAA64967, gB, DPOL and gD], human herpesvirus 1 (HHV1) [GenBank:NP_044629, GenBank:NP_044632, GenBank:CAA32283, gB, DPOL and gD], human herpesvirus 2 (HHV2) [GenBank:NP_044497, GenBank:NP_044500, GenBank:AAB60553, gB, DPOL and gD], human herpesvirus 3 (HHV3) [GenBank:NP_040154.2, GenBank:NP_040151, gB and DPOL], saimiriine herpesvirus 1 (SaHV1) [GenBank:YP_003933812, GenBank:YP_003933809, GenBank:ADO13836, gB, DPOL and gD], bovine herpesvirus 1 (BoHV1) [GenBank:AAA46013, GenBank:NP_045328, GenBank:CAA80604, gB, DPOL and gD], bovine herpesvirus 2 (BoHV2) [GenBank:P12641.2, GenBank:AAD55134:, gB and DPOL], bovine herpesvirus 5 (BoHV5) [GenBank:YP_003662497, GenBank:YP_003662494, GenBank:AAA67359, gB, DPOL and gD], canine herpesvirus 1 (CHV) [GenBank:AAK51052, GenBank:AAX47050, GenBank:AAB67058, gB, DPOL and gD], felid herpesvirus 1 (FeHV1) [GenBank:AAB28559, GenBank:YP_003331549, GenBank:BAA06442, gB, DPOL and gD], equine herpesvirus 1 (EHV1) [GenBank:Q6DLH8, GenBank:YP_053075, GenBank:AAA46073, gB, DPOL and gD], equine herpesvirus 4 (EHV4) [GenBank:NP_045250, GenBank:NP_045247, GenBank:NP_045289, gB, DPOL and gD], suid herpesvirus 1 (PRV) [GenBank:YP_068330, GenBank:YP_068333, GenBank:AAC36717, gB, DPOL and gD].

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