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Figure 1. Phylogenetic trees of Metagenome-assembled genomes (MAGs) recovered from P. lutea and I. palifera skeleton. a) 376 bacterial MAGs, with genome completeness, GC content, and genes-of-interest and b) 17 archeal MAGs with the presence of ammonia oxidising gene AmoA. The phylogenetic tree was constructed using a concatenated alignment of 120 bacterial and 122 archeal marker genes, respectively. Taxonomic annotation of bacterial MAGs  (counterclockwise): Proteobacteria, Desulfobacterota, DSWW01, Desulfobacteriota_F, Nitrospinota, Bdellovibrionota, Desulfobacterota_B, Myxococcota, SAR324. Bdellovibrionota, Acidibacteriota, Bacteroidota, Calditrichota, SM23-31, AABM5-125-54, Marinosomatota, Zixibacteria, Gemmatimondota, Fibriobacterota, Elusimicrobiota, Omnitrophota, Sumerlaeota, Planctomycetota, Verrucomicrobiota, Chlamydiota, Spirochaetota, Firmicutes_A, Firmicutes, Fimicutes_H, Firmicutes_G, Cyanobacteria, Chloroflexota, Patescibacteria, Actinobacteriota, Bipolaricaulota. 

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