WyresMGen2016_assemblies.zip (4.04 GB)

Klebsiella genome assemblies used in Wyres et al MGen 2016: Identification of Klebsiella capsule synthesis loci from whole genome data

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posted on 24.05.2017 by KELLY WYRES, RYAN WICK, Claire Gorrie, ADAM JENNEY, Rainer Follador, NICHOLAS THOMSON, KATHRYN HOLT

If you use these assemblies please cite the publication below and acknowledge the relevant database and/or original research articles describing the raw sequence data.

Wyres, K.L., Wick, R.R., Gorrie, C., Jenney, A., Follador, R, Thomson, N.R. and Holt K.E. Identification of Klebsiella capsule synthesis loci from whole genome data. (2016) MGen 2, doi: 10.1099/mgen.0.000102

The assemblies include those available in the Patric online database and from the NCTC3000 genomes project plus assemblies generated by the Holt Lab. Please see the above paper in MGen for a description of the assembly method and citations for the raw sequence reads.

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This work was funded by the National Health and Medical Research Council (NHMRC) of Australia (fellowship no. 1061409 and project no. 1043822 to K. E. H.) and Wellcome Trust (grant no. 098051 to the Wellcome Trust Sanger Institute).

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