%0 Generic %A Hawkey, Jane %A JUDD, LOUISE %A Kostoulias, Xenia %A ASCHER, DAVID %A Wick, Ryan %A Peleg, Anton %A HOLT, KATHRYN %D 2017 %T Microevolution of Acinetobacter baumannii on a single patient %U https://melbourne.figshare.com/articles/dataset/Microevolution_of_Acinetobacter_baumannii_on_a_single_patient/5281033 %R 10.4225/49/5987e14e9b530 %2 https://melbourne.figshare.com/ndownloader/files/9042523 %2 https://melbourne.figshare.com/ndownloader/files/9042526 %2 https://melbourne.figshare.com/ndownloader/files/9042529 %2 https://melbourne.figshare.com/ndownloader/files/9042532 %2 https://melbourne.figshare.com/ndownloader/files/9042538 %2 https://melbourne.figshare.com/ndownloader/files/9042535 %2 https://melbourne.figshare.com/ndownloader/files/9042541 %2 https://melbourne.figshare.com/ndownloader/files/9042544 %2 https://melbourne.figshare.com/ndownloader/files/9042580 %K acinetobacter baumannii %K genomics %K microevolution %K within patient %K nanopore %K hybrid assembly %K Microbial Genetics %K Microbiology %K Genomics %X Hybrid genome assemblies (Illumina + Nanopore) for nine Acinetobacter baumannii genomes isolated from three patients in the ICU of a Melbourne hospital. A1 and A23 are from two different patients, and the remaining samples come from a single patient. Genomes were assembled using Unicycler (https://github.com/rrwick/Unicycler), and annotated using RAST.

Eight of the genomes are completed assemblies with a chromosome and plasmid. A3 does not contain the plasmid. A23 was unable to be completely assembled, and is broken into 176 contigs.
%I The University of Melbourne