Microevolution of Acinetobacter baumannii on a single patient
Jane Hawkey
LOUISE JUDD
Xenia Kostoulias
DAVID ASCHER
Ryan Wick
Anton Peleg
KATHRYN HOLT
10.4225/49/5987e14e9b530
https://melbourne.figshare.com/articles/dataset/Microevolution_of_Acinetobacter_baumannii_on_a_single_patient/5281033
Hybrid genome assemblies (Illumina + Nanopore) for nine Acinetobacter baumannii genomes isolated from three patients in the ICU of a Melbourne hospital. A1 and A23 are from two different patients, and the remaining samples come from a single patient. Genomes were assembled using Unicycler (https://github.com/rrwick/Unicycler), and annotated using RAST. <div><br></div><div>Eight of the genomes are completed assemblies with a chromosome and plasmid. A3 does not contain the plasmid. A23 was unable to be completely assembled, and is broken into 176 contigs.</div>
2017-09-12 01:44:54
acinetobacter baumannii
genomics
microevolution
within patient
nanopore
hybrid assembly
Microbial Genetics
Microbiology
Genomics