10.4225/49/5987e14e9b530
Jane Hawkey
Jane
Hawkey
LOUISE JUDD
LOUISE
JUDD
Xenia Kostoulias
Xenia
Kostoulias
DAVID ASCHER
DAVID
ASCHER
Ryan Wick
Ryan
Wick
Anton Peleg
Anton
Peleg
KATHRYN HOLT
KATHRYN
HOLT
Microevolution of Acinetobacter baumannii on a single patient
The University of Melbourne
2017
acinetobacter baumannii
genomics
microevolution
within patient
nanopore
hybrid assembly
Microbial Genetics
Microbiology
Genomics
2017-09-12 01:44:54
Dataset
https://melbourne.figshare.com/articles/dataset/Microevolution_of_Acinetobacter_baumannii_on_a_single_patient/5281033
Hybrid genome assemblies (Illumina + Nanopore) for nine Acinetobacter baumannii genomes isolated from three patients in the ICU of a Melbourne hospital. A1 and A23 are from two different patients, and the remaining samples come from a single patient. Genomes were assembled using Unicycler (https://github.com/rrwick/Unicycler), and annotated using RAST. <div><br></div><div>Eight of the genomes are completed assemblies with a chromosome and plasmid. A3 does not contain the plasmid. A23 was unable to be completely assembled, and is broken into 176 contigs.</div>